BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027G11LP1|AL428789
(861 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1096 1686 0.0
>3x_Contig1096
Length = 4235
Score = 1686 bits (849), Expect = 0.0
Identities = 857/861 (99%)
Strand = Plus / Minus
Query: 1 gatctgtattgttggtggttatgatgatttccaagaagaaggttcttatgagttcggtaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3962 gatctgtattgttggtggttatgatgatttccaagaagaaggttcttatgagttcggtaa 3903
Query: 61 catgaaggctacttccaatactttggaagaatacgaaaatggtcgtaccccagctgaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3902 catgaaggctacttccaatactttggaagaatacgaaaatggtcgtaccccagctgaaat 3843
Query: 121 gtccagacctaccactacaactcgtaacggtttcatggaagctcaaggtgccggtatcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3842 gtccagacctaccactacaactcgtaacggtttcatggaagctcaaggtgccggtatcca 3783
Query: 181 agttatcatgactgctgatttggctttgaagatgggtgttccaatctatggtatcttggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3782 agttatcatgactgctgatttggctttgaagatgggtgttccaatctatggtatcttggc 3723
Query: 241 tatgactgccactgccactgataagatcggtagatctgttcctgctccaggtaagggtat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3722 tatgactgccactgccactgataagatcggtagatctgttcctgctccaggtaagggtat 3663
Query: 301 cttgaccactgcaagagaacatcacggtaacttgaagttcccatctccaatgttggacat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3662 cttgaccactgcaagagaacatcacggtaacttgaagttcccatctccaatgttggacat 3603
Query: 361 caagtacagaaagagacaattgttagctcgtgaacaacaaatcaagcaatgggttgaaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3602 caagtacagaaagagacaattgttagctcgtgaacaacaaatcaagcaatgggttgaaaa 3543
Query: 421 cgaaattgaaatgttgagatacgaattggaagatgtttctgcagaagaacaacaagagtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3542 cgaaattgaaatgttgagatacgaattggaagatgtttctgcagaagaacaacaagagtt 3483
Query: 481 catccaagaacgtaccgaggaaattgaacgtgaagcttctaaccaattgawatctgctca 540
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 3482 catccaagaacgtaccgaggaaattgaacgtgaagcttctaaccaattgaaatctgctca 3423
Query: 541 acagcaatggggtaacgaattctacaaatctgatccaagaattgctccactgagaggtgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3422 acagcaatggggtaacgaattctacaaatctgatccaagaattgctccactgagaggtgc 3363
Query: 601 cttggccactttcggtttgaccattgatgacttgggcgttgcctcattccatggtaccag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3362 cttggccactttcggtttgaccattgatgacttgggcgttgcctcattccatggtaccag 3303
Query: 661 taccaaggccaacgataagaacgaatctgccacaatcaacgaaatgatgaagcatttggg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3302 taccaaggccaacgataagaacgaatctgccacaatcaacgaaatgatgaagcatttggg 3243
Query: 721 cagatccgaagtamacccagttattggtgtgttccaaaagtacttgactggtcatccaaa 780
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3242 cagatccgaaggtaacccagttattggtgtgttccaaaagtacttgactggtcatccaaa 3183
Query: 781 gggtgccgctggtgcatggatgatgaacggtgctttgcaaattttgaactctggtattgt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3182 gggtgccgctggtgcatggatgatgaacggtgctttgcaaattttgaactctggtattgt 3123
Query: 841 tccaggtaaccgtaatgcaga 861
|||||||||||||||||||||
Sbjct: 3122 tccaggtaaccgtaatgcaga 3102
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6611
Number of Sequences: 1807
Number of extensions: 6611
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 1
length of query: 861
length of database: 10,358,551
effective HSP length: 16
effective length of query: 845
effective length of database: 10,329,639
effective search space: 8728544955
effective search space used: 8728544955
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)